[slicer-users] slicer 3.4 trouble starting

Dominik Meier meier at bwh.harvard.edu
Tue Jan 19 10:07:50 EST 2010


Hi Dianne

I've had similar issues, there are some quirks with the Mac Unix  
environment that may need tweaking, depending on architecture and OS.

I've added the DYLD library path line below to by .bashrc file to be  
able to launch 3.5 on my PowerMac:

export DYLD_LIBRARY_PATH=$DYLD_LIBRARY_PATH:/Applications/ 
Slicer3-3.5a/lib/InsightToolkit:/Applications/Slicer
3-3.5a/lib/MRML/:/Applications/Slicer3-3.5a/lib/vtkITK:/Applications/ 
Slicer3-3.5a/lib/vtk-5.4:/Applications/Sl
icer3-3.5a/lib/FreeSurfer:/Applications/Slicer3-3.5a/lib/ 
libvtkTeem.dylib:/Applications/Slicer3-3.5a/lib/vtkTe
em:/Applications/Slicer3-3.5a/lib/Teem-1.10.0

Also you may have to launch X11 first before starting slicer, as it  
sets different environment variables than "terminal".


______________________________________________
DOMINIK MEIER, PH.D.
Assistant Professor of Radiology, Harvard Medical School
Center for Neurological Imaging, Brigham & Women's Hospital
221 Longwood Avenue, RF396, Boston, MA 02115
Phone: 617 278-0800
Fax: 617 264-5154



On Jan 18, 2010, at 7:47 PM, Dianne Patterson wrote:

> I tarred up my old Slicer dir (version 3.2) and untarred the new  
> Slicer (3.4.2-2010-01-06-darwin-x86.tar.gz)
> I'm on Mac OSX Leopard on an Intel Mac Pro.
>
> When I try to start slicer, it goes down into the bin and grabs  
> Slicer3-real, which apparently it cannot start.
> If I force it to grab Slicer3 from the main Slicer directory, it  
> will start, but this feels like a hack..
> I don't see any mention of the issue online, so I wanted to let you  
> know.
>
> [seth:/usr/local 275] % Slicer3
> dyld: Library not loaded: /Users/hayes/Slicer-3-4/Slicer3-lib/teem- 
> build/bin/libteem.1.dylib
>   Referenced from: /usr/local/Slicer/bin/Slicer3-real
>   Reason: image not found
> Trace/BPT trap
> --------
>
> Thankyou,
>
> Dianne
>
>
> -- 
> Dianne Patterson, Ph.D.
> dkp at u.arizona.edu
> University of Arizona
> SLHS 328
> 621-5105
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