[slicer-users] Fast Marching segmentation module called from Python

Madan Rao rao.lms at gmail.com
Sun Feb 28 23:10:22 EST 2010


Hello all,

...any object available to Tcl is the same object available to Python, and
this allows for a great flexibility, as everything lives in a common space.

http://www.slicer.org/slicerWiki/index.php/Slicer3:Python

AM Mohan Rao


On Mon, Mar 1, 2010 at 6:56 AM, John Fredy <jfochoaster at gmail.com> wrote:

> Hello Andriy, all the modules are command line, maybe the best option is
> try to program the module based in the tcl script
>
> Thanks
>
>
> John
>
> On Sun, Feb 28, 2010 at 2:59 PM, Andriy Fedorov <fedorov at bwh.harvard.edu>wrote:
>
>> Hello John,
>>
>> Please note that fast marching is a scripted, interactive Tcl module.
>> First, since this is an interactive module, I do not think it is
>> suitable for batch invocation. Second, I do not know if Tcl module
>> invocation is technically possible from python console. Maybe python
>> experts can help here.
>>
>> Are there any interactive scripted Tcl modules among those 87 that you
>> recovered?
>>
>> AF
>>
>>
>>
>> On Sat, Feb 27, 2010 at 22:07, John Fredy <jfochoaster at gmail.com> wrote:
>> > Hello Wallace
>> >
>> > I am using the fast marching module that comes from default in slicer,
>> is
>> > the invocation of the module from the python console that don´t work
>> >
>> > Somebody have a complete guide for python programming in the 3DSlicer
>> > platform?
>> >
>> > Regards
>> >
>> > On Sat, Feb 27, 2010 at 8:51 PM, <swallace at nmr.mgh.harvard.edu> wrote:
>> >>
>> >> Have you tried a manual installation:
>> >>
>> >> svn checkout https://www.nitrc.org/svn/slicervmtklvlst
>> >>
>> >> Let us know if that doesnt do the trick...
>> >>
>> >>
>> >> > hello all,
>> >> >
>> >> > I am trying to call the Fast Marching Segmentation module from the
>> >> > Python
>> >> > console ( plugin2 = Slicer.Plugin("Fast Marching Segmentation") ), I
>> >> > have
>> >> > recovered 87 modules but the Fast Marching is not included, How I can
>> >> > obtain
>> >> > that module from the Python console?
>> >> >
>> >> >
>> >> > Thanks in advance
>> >> > _______________________________________________
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>> the
>> >> > subject
>> >>
>> >
>> >
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>
>
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