[slicer-users] EMSegmentCommandLine errors

Madan Rao rao.lms at gmail.com
Tue Mar 16 09:22:24 EDT 2010


Hello Steve,

Thanks. It seems to be working now by following your suggestion.

However, I cant get the --help running from cmd by:

Slicer3 --launch EMSegmentCommandLine --help

Can you explain it?

AM Mohan Rao


On Tue, Mar 16, 2010 at 3:31 PM, Steve Pieper <pieper at bwh.harvard.edu>wrote:

> Hi Mohan -
>
> I'm not sure about the color file issue (perhaps Nicole knows).
>
> But for the dll issue you should be able to run a command like:
>
>  <path to>/Slicer3.exe --launch EMSegmentCommandLine.exe
>
> this will set up the paths for you so you don't need to copy anything to
> the system directories.
>
> Best,
> Steve
>
>
> On M/16/10 3:41 AM, Madan Rao wrote:
>
>> Hello all,
>>
>> I also tried running the exe after creating the path in the error and
>> keeping the txt file with no result.
>>
>> AM Mohan Rao
>>
>> On Tue, Mar 16, 2010 at 1:03 PM, Madan Rao <rao.lms at gmail.com
>> <mailto:rao.lms at gmail.com>> wrote:
>>
>>    Hello all,
>>
>>    I am trying to run the Segmentation on EMSegmentCommandLine.exe from
>>    cmd or cygwin on windows vista using the tutorial data.
>>
>>    I get the following error:
>>
>>    ERROR: In
>>    ..\..\..\Slicer3\Libs\MRML\vtkMRMLColorTableStorageNode.cxx, line 255
>>    vtkMRMLColorTableStorageNode (04C3CE90): ERROR opening colour file
>>    /home/rao/share/FreeSurfer/FreeSurferColorLUT.txt
>>
>>    I have Slicer3-build using Cygwin. I am able to run the --help
>>    command from the EMSegmentCommndLine.exe after adding about 48 *.dll
>>    files
>>    to my system32 library.
>>
>>    Can anyone help please?
>>
>>    AM Mohan Rao
>>
>>
>>
>>
>>
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