[slicer-users] FW:Help - DICOM does not load in Slicer 3.6

Yanling Liu vrnova at gmail.com
Wed Jul 7 10:01:31 EDT 2010


No, I can not load them in Slicer. Based on the error message it sounds like
a ITK problem.

vtkMRMLVolumeArchetypeStorageNode (0x85a5f10): ReadData: Cannot read file,
fullName = /home/yliu/Downloads/subj006reg001/001.DCM, number of files
listed in the node = 0, the ITK reader says it was able to read 0 files, the
reader used the archetype file name of
/home/yliu/Downloads/subj006reg001/001.DCM


On Wed, Jul 7, 2010 at 9:54 AM, Saurabh Gupta 402549 <
Saurabh_402549 at infosys.com> wrote:

>  Thanks Yanling
>
>
>
> @Yanling – Can you load them in Slicer ?
>
>
>
> So any idea, anyone, as to what the problem could be ?
>
>
>
> Saurabh
>
>
>
> *From:* Yanling Liu [mailto:vrnova at gmail.com]
> *Sent:* Wednesday, July 07, 2010 7:22 PM
>
> *To:* Saurabh Gupta 402549
> *Cc:* Magnotta, Vincent A; slicer-users at bwh.harvard.edu
> *Subject:* Re: [slicer-users] FW:Help - DICOM does not load in Slicer 3.6
>
>
>
> Yep, ImageJ and ITK-SNAP can load you data successfully.
>
> On Wed, Jul 7, 2010 at 9:37 AM, Saurabh Gupta 402549 <
> Saurabh_402549 at infosys.com> wrote:
>
> Hi Yanling
>
>
>
> Yes I have opened the DICOM images on MicroDicom, a DICOM viewer. It shows
> all the images perfectly and also lists the various DICOM tags. So I think
> the dataset is fine. I am attaching the dataset with this email.
>
>
>
> Saurabh
>
>
>
> *From:* Yanling Liu [mailto:vrnova at gmail.com]
> *Sent:* Wednesday, July 07, 2010 7:02 PM
> *To:* Saurabh Gupta 402549
> *Cc:* Magnotta, Vincent A; slicer-users at bwh.harvard.edu
> *Subject:* Re: [slicer-users] FW:Help - DICOM does not load in Slicer 3.6
>
>
>
> Just curious, have you tried to use other programs such as ImageJ to open
> the DICOM dataset? It would be nice to make sure no problem in the dataset.
>
> Yanling
>
> On Wed, Jul 7, 2010 at 9:26 AM, Saurabh Gupta 402549 <
> Saurabh_402549 at infosys.com> wrote:
>
> Hi Vince
>
> I renamed the directory. I even renamed the files to follow sequential
> order from 001.DCM ... but still it's giving the same error. I can't see any
> description when I select a file in the Add Volume Selection Box that pops
> up.
>
> Regards
> Saurabh
>
>
> -----Original Message-----
> From: Magnotta, Vincent A [mailto:vincent-magnotta at uiowa.edu]
> Sent: Wednesday, July 07, 2010 6:19 PM
> To: Saurabh Gupta 402549; slicer-users at bwh.harvard.edu
> Subject: RE: [slicer-users] FW:Help - DICOM does not load in Slicer 3.6
>
> Try renaming the directory that contains the DICOM files. The .dcm
> extension on the directory may be causing problems.
>
> Vince
>
> -----Original Message-----
> From: Saurabh Gupta 402549 <Saurabh_402549 at infosys.com>
> Sent: Wednesday, July 07, 2010 5:29 AM
> To: slicer-users at bwh.harvard.edu <slicer-users at bwh.harvard.edu>
> Subject: [slicer-users] FW:Help - DICOM does not load in Slicer 3.6
>
>
>
> From: Saurabh Gupta 402549
> Sent: Wednesday, July 07, 2010 3:39 PM
> To: 'slicer-users at bwh.harvard.edu'
> Subject: DICOM does not load in Slicer 3.6
>
> Hi
>
> I tried adding DICOM files as volume in Slicer 3.6 and it gives this error
> :-
>
> ERROR: In ..\..\..\Slicer3\Libs\MRML\vtkMRMLVolumeArchetypeStorageNode.cxx,
> line 330
> vtkMRMLVolumeArchetypeStorageNode (18AD5198): ReadData: Cannot read file,
> fullName = D:/DICOM/subj006reg001.dcm/GE2FVHF4.DCM, number of files listed
> in the node = 0, the ITK reader says it was able to read 0 files, the reader
> used the archetype file name of D:/DICOM/subj006reg001.dcm/GE2FVHF4.DCM
>
> Is there a way, I can resolve it ?
>
> Thanks
> Saurabh
>
>
> **************** CAUTION - Disclaimer *****************
> This e-mail contains PRIVILEGED AND CONFIDENTIAL INFORMATION intended
> solely
> for the use of the addressee(s). If you are not the intended recipient,
> please
> notify the sender by e-mail and delete the original message. Further, you
> are not
> to copy, disclose, or distribute this e-mail or its contents to any other
> person and
> any such actions are unlawful. This e-mail may contain viruses. Infosys has
> taken
> every reasonable precaution to minimize this risk, but is not liable for
> any damage
> you may sustain as a result of any virus in this e-mail. You should carry
> out your
> own virus checks before opening the e-mail or attachment. Infosys reserves
> the
> right to monitor and review the content of all messages sent to or from
> this e-mail
> address. Messages sent to or from this e-mail address may be stored on the
> Infosys e-mail system.
> ***INFOSYS******** End of Disclaimer ********INFOSYS***
> _______________________________________________
> slicer-users mailing list
> slicer-users at bwh.harvard.edu
> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
> To unsubscribe: send email to
> slicer-users-request at massmail.spl.harvard.edu with unsubscribe as the
> subject
>
>
>
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://massmail.spl.harvard.edu/pipermail/slicer-users/attachments/20100707/6179d9f1/attachment.html>


More information about the slicer-users mailing list