[slicer-users] White matter u segmentation

Madan Rao rao.lms at gmail.com
Wed Feb 16 22:20:49 EST 2011


Hello Gabriella,

Have you tried Slicer3 EM segment tutorial ?

http://www.slicer.org/slicerWiki/images/2/2b/EMSegTutorial-AHM2008.ppt

Please check:

http://www.slicer.org/publications/item/view/1265

and download the brain atlas.

Hope this helps.

AM Mohan Rao

On Thu, Feb 17, 2011 at 5:37 AM, tanya <tanyapolgar at yahoo.com> wrote:

> Dear "Slicer-ers"!
> I have been trying to use the lesion segmentation module as described in
> the lupus lesion tutorial and it works fine for the tutorial dataset. Can
> someone tell what tutorial(s) do I need to use to get to the tutorial
> dataset on my own images, i.e. for brain extraction and binary correction to
> preprocess the images?
> I have tried several segmentation and filtering modules, also the edit box,
> however, none of them seem to do a good job on MS-related white matter
> lesions, kind of bread and butter neuroimaging.
> Your help is greatly appreciated.
> Gabriella Szatmary, MD, PhD
>
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